The CYP2D6 variant call format (VCF) Translator v1.0 converts CYP2D6 sequence variants from human genome assembly GRCh37/hg19 coordinates to the M33388.1 and AY545216.1 GenBank reference sequence coordinates, which are commonly used for CYP2D6 star (*) allele conversion.
An example VCF is here.
Please cite the following reference as needed:
Qiao W, Wang J, Pullman BS, Chen R, Yang Y, Scott SA. The CYP2D6 VCF translator. Pharmacogenomics J, 2016. [Epub 2016 Mar 15.]
Please send questions or comments here.